NDLI: MALDI-MS dataset for use with open-source untargeted metabolomic workflow for complex biological samples

Please wait, while we are loading the content...

MALDI-MS dataset for use with open-source untargeted metabolomic workflow for complex biological samples

Content Provider	Dryad
Author	Walker, Heather
Abstract	Untargeted metabolomics is a powerful tool for measuring and understanding complex biological chemistries. However, employment, bioinformatics and downstream analysis of mass spectrometry (MS) data can be daunting for inexperienced users. Numerous open-source and free to-use data processing and analysis tools exist for various untargeted MS approaches, but choosing the ‘correct’ pipeline isn’t straight-forward. This data set can be used in conjunction with a user-friendly online guide which presents a workflow for connecting these tools to process, analyse and annotate various untargeted MS datasets. The workflow is intended to guide exploratory analysis in order to inform decision-making regarding costly and time-consuming downstream targeted MS approaches. The workflow provides practical advice concerning experimental design, organisation of data and downstream analysis, and offers details on sharing and storing valuable MS data for posterity. The workflow is editable and modular, allowing flexibility for updated/ changing methodologies and increased clarity and detail as user participation becomes more common allowing contributions and improvements to the workflow via the online repository.
File Size	1692981205
File Format	HTM / HTML
ISSN	22181989
DOI	10.5061/dryad.dbrv15f5c
Alternate Webpage(s)	https://datadryad.org/stash/downloads/file_stream/2109165
Alternate Webpage(s)	https://datadryad.org/stash/downloads/file_stream/2109167
Alternate Webpage(s)	https://datadryad.org/stash/downloads/file_stream/2109131
Language	English
Publisher Date	2023-02-17
Access Restriction	Open
Subject Keyword	Bioinformatics Maldi Tof Mass Spectrometry Untargeted Metabolomics Open-source
Content Type	Text
Resource Type	Data Set
Subject	Endocrinology, Diabetes and Metabolism Molecular Biology Biochemistry

Central Library (ISO-9001:2015 Certified)
Indian Institute of Technology Kharagpur
Kharagpur, West Bengal, India | PIN - 721302

See location in the Map
03222 282435
Mail: support@ndl.gov.in

Sl.	Authority	Responsibilities	Communication Details
1	Ministry of Education (GoI), Department of Higher Education	Sanctioning Authority	https://www.education.gov.in/ict-initiatives
2	Indian Institute of Technology Kharagpur	Host Institute of the Project: The host institute of the project is responsible for providing infrastructure support and hosting the project	https://www.iitkgp.ac.in
3	National Digital Library of India Office, Indian Institute of Technology Kharagpur	The administrative and infrastructural headquarters of the project	Dr. B. Sutradhar bsutra@ndl.gov.in
4	Project PI / Joint PI	Principal Investigator and Joint Principal Investigators of the project	Dr. B. Sutradhar bsutra@ndl.gov.in Prof. Saswat Chakrabarti will be added soon
5	Website/Portal (Helpdesk)	Queries regarding NDLI and its services	support@ndl.gov.in
6	Contents and Copyright Issues	Queries related to content curation and copyright issues	content@ndl.gov.in
7	National Digital Library of India Club (NDLI Club)	Queries related to NDLI Club formation, support, user awareness program, seminar/symposium, collaboration, social media, promotion, and outreach	clubsupport@ndl.gov.in
8	Digital Preservation Centre (DPC)	Assistance with digitizing and archiving copyright-free printed books	dpc@ndl.gov.in
9	IDR Setup or Support	Queries related to establishment and support of Institutional Digital Repository (IDR) and IDR workshops	idr@ndl.gov.in