NDLI: BIOINFORMATICS APPLICATIONS NOTE doi:10.1093/bioinformatics/btn042 Database and ontologies ONTO-PERL: An API for supporting the development and analysis of bio-ontologies

Content Provider	CiteSeerX
Author	Mironov, Vladimir Antezana, Erick Kuiper, Martin Baets, Bernard De
Abstract	Motivation: Many biomedical ontologies use OBO or OWL as knowledge representation language. The rapid increase of such ontologies calls for adequate tools to facilitate their use. In particular, there is a pressing need to programmatically deal with such ontologies in many applications, including data integration, text mining, as well as semantic applications supporting translational research. Results: We present an Application Programming Interface (API) called ONTO-PERL. This API significantly extends the repertoire of available tools supporting the development and analysis of bio-ontologies. Availability: The source code code as well as sample usage scripts can be found at:
File Format	PDF
Access Restriction	Open
Subject Keyword	Adequate Tool Many Biomedical Ontology Bioinformatics Btn042 Database Translational Research Sample Usage Script Knowledge Representation Language Semantic Application Source Code Code
Content Type	Text

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