NDLI: Trainable, vision-based automated home cage behavioral phenotyping

Content Provider	ACM Digital Library
Author	Jhuang, Hueihan Serre, Thomas Poggio, Tomaso Edelman, Nicholas Steele, Andrew Garrote, Estibaliz
Abstract	We describe a fully trainable computer vision system enabling the automated analysis of complex mouse behaviors. Our system computes a sequence of feature descriptors for each video sequence and a classifier is used to learn a mapping from these features to behaviors of interest. We collected a very large manually annotated video database of mouse behaviors for training and testing the system. Our system performs on par with human scoring, as measured from the ground-truth manual annotations of thousands of clips of freely behaving mice. As a validation of the system, we characterized the home cage behaviors of two standard inbred and two nonstandard mouse strains. From this data, we were able to predict the strain identity of individual mice with high accuracy.
Starting Page	1
Ending Page	4
Page Count	4
File Format	PDF
ISBN	9781605589268
DOI	10.1145/1931344.1931377
Language	English
Publisher	Association for Computing Machinery (ACM)
Publisher Date	2010-08-24
Publisher Place	New York
Access Restriction	Subscribed
Subject Keyword	Computer vision Mouse Phenotyping Behavior recognition Rodent
Content Type	Text
Resource Type	Article

Sl.	Authority	Responsibilities	Communication Details
1	Ministry of Education (GoI), Department of Higher Education	Sanctioning Authority	https://www.education.gov.in/ict-initiatives
2	Indian Institute of Technology Kharagpur	Host Institute of the Project: The host institute of the project is responsible for providing infrastructure support and hosting the project	https://www.iitkgp.ac.in
3	National Digital Library of India Office, Indian Institute of Technology Kharagpur	The administrative and infrastructural headquarters of the project	Dr. B. Sutradhar bsutra@ndl.gov.in
4	Project PI / Joint PI	Principal Investigator and Joint Principal Investigators of the project	Dr. B. Sutradhar bsutra@ndl.gov.in Prof. Saswat Chakrabarti will be added soon
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Trainable, vision-based automated home cage behavioral phenotyping